Journal of Histochemistry and Cytochemistry
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Originally published as JHC exPRESS on October 29, 2009.
doi:10.1369/jhc.2009.954701
Journal of Histochemistry and Cytochemistry
Volume 58 (2): 207-218, 2010
Copyright © 2010 Lentz et al.
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Mitochondrial DNA (mtDNA) Biogenesis: Visualization and Duel Incorporation of BrdU and EdU Into Newly Synthesized mtDNA In Vitro

Stephen I. Lentz, James L. Edwards, Carey Backus, Lisa L. McLean, Kristine M. Haines and Eva L. Feldman

Department of Internal Medicine, Division of Metabolism, Endocrinology, and Diabetes (SIL), Department of Neurology (JLE,CB,LLM,ELF), Michigan Research Community, Undergraduate Research Opportunity Program (KMH), and A. Alfred Taubman Medical Research Institute (ELF), University of Michigan, Ann Arbor, Michigan

Correspondence to: Stephen I. Lentz, PhD, University of Michigan Department of Internal Medicine, 3062 BSRB, 109 Zina Pitcher Place, Ann Arbor, MI 48109. E-mail: lentzs{at}umich.edu

Mitochondria are key regulators of cellular energy and are the focus of a large number of studies examining the regulation of mitochondrial dynamics and biogenesis in healthy and diseased conditions. One approach to monitoring mitochondrial biogenesis is to measure the rate of mitochondrial DNA (mtDNA) replication. We developed a sensitive technique to visualize newly synthesized mtDNA in individual cells to study mtDNA replication within subcellular compartments of neurons. The technique combines the incorporation of 5-bromo-2-deoxyuridine (BrdU) and/or 5-ethynyl-2'-deoxyuridine (EdU) into mtDNA, together with a tyramide signal amplification protocol. Employing this technique, we visualized and measured mtDNA biogenesis in individual cells. The labeling procedure for EdU allows for more comprehensive results by allowing the comparison of its incorporation with other intracellular markers, because it does not require the harsh acid or enzyme digests necessary to recover the BrdU epitope. In addition, the utilization of both BrdU and EdU permits sequential pulse–chase experiments to follow the intracellular localization of mtDNA replication. The ability to quantify mitochondrial biogenesis provides an essential tool for investigating the alterations in mitochondrial dynamics involved in the pathogenesis of multiple cellular disorders, including neuropathies and neurodegenerative diseases. (J Histochem Cytochem 58:207–218, 2010)

Key Words: mitochondrial DNA • mitochondrial biogenesis • dorsal root ganglion neurons • 5-bromo-2-deoxyuridine • 5-ethynyl-2'-deoxyuridine


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