Originally published as JHC exPRESS on April 14, 2008. doi:10.1369/jhc.2008.950733
Volume 56 (8): 723-731, 2008 Copyright ©The Histochemical Society, Inc.
C9orf10 Protein, a Novel Protein Component of Pur
Research Unit of Biochemistry (YK,KS,SO,KK,KA) and Research Unit of Genome Science (HK), College of Pharmacy, Nihon University, Chiba, Japan; Division of Neuronal Cell Biology, Medical University of Vienna, Center for Brain Research, Vienna, Austria (PM,MK); and Department of Molecular Neurobiology, Institute of Development, Aging and Cancer, Tohoku University, Sendai, Japan (YK) Correspondence to: Kaijiro Anzai, Research Unit of Biochemistry, College of Pharmacy, Nihon University, 7-7-1, Narashinodai, Funabashi, Chiba 274-8555, Japan. E-mail: kaijiroa{at}pha.nihon-u.ac.jp
Pur has been implicated in mRNA transport and translation in neurons. We previously reported that Pur is a component of mRNA/protein complexes (Pur -mRNPs) with several other proteins. Among them, we found the C9orf10 (Homo sapiens chromosome 9 open reading frame 10) protein, which was recently characterized as a component of RNA-containing structures. However, C9orf10 itself remains poorly understood. To characterize C9orf10 expression at the protein level, we raised an antibody against C9orf10 and compared the spatial and developmental expressions of this protein and Pur in the mouse brain. C9orf10 was expressed as early as embryo stage 12, whereas Pur was expressed from 5 days after birth. In adults, C9orf10 expression was most prominent in the hippocampus, caudate putamen, cerebral cortex, and cerebellum, unlike the uniform distribution of Pur . C9orf10-positive cells also showed immunoreactivity to Pur . C9orf10 expression was restricted to neurons, judging by the immunoreactivity to neuron-specific nuclear protein or CaM kinase II. These observations suggest an accessory role of C9orf10 for Pur in a limited brain region in addition to other possible functions that have not yet been determined. (J Histochem Cytochem 56:723–731, 2008)
Key Words: Pur
C9orf10 (Homo sapiens chromosome 9 open reading frame 10) was originally found by the human genome sequence project as an annotated protein, and the gene was mapped to chromosome 9q22.31. Thus far, this protein has been detected in some RNA-containing structures, such as mRNA granules (Bannai et al. 2004
In a previous study to determine the binding partners of Pur
These biological aspects of Pur
Sources of Antibodies Rabbit anti-Pur antibody was raised by our laboratory and affinity purified as described previously (Ohashi et al. 2002Rabbit anti-C9orf10 antibody was raised in our laboratory against mixed peptides corresponding to amino acids 413-426 (QNSYSNIPHEGKHT; referred to as JB204) and 1062–1075 (TGDPRVPSHSESAL; referred to as JB205) of C9orf10 (NCBI accession number NP_001028440.2), whose sequences have no meaningful homology with other members of this gene family, such as CXorf17 and BC012177, and was affinity purified using the peptides. The affinity purified antibody was used at a concentration of 1:2000 dilutions for Western blot analysis and 1:200 dilutions for IHC.
The other antibodies used were obtained from the following sources. Rabbit anti-S6 ribosomal protein antibody was obtained from Cell Signaling Technologies (Danvers, MA) and used at 1:2000 dilutions for Western blot analysis. Mouse anti-CaM kinase II (CaMKII) antibody, clone 6G9, which reacts with
Animals
Preparation of Tissue Extracts
Western Blot Analysis
Immunoprecipitation Analysis
Fixation of Tissue Samples
IHC
The specificity of the anti-C9orf10 antibody was confirmed by preincubation of the antibody with a 30-fold amount of JB205 peptide overnight at 4C before processing for IHC. The specificity of the anti- Pur Double labeling with anti-C9orf10 and anti-NeuN antibodies or anti-C9orf10 and anti-CaMKII antibodies was accomplished by the simultaneous application of both antibodies. After the sections were incubated with the first antibodies, the sections were incubated with Alexa Fluor 488–conjugated anti-rabbit IgG and Alexa Fluor 555–conjugated anti-mouse IgG for 1 hr at room temperature and washed with PBST. As the negative control, specimens were labeled with the secondary antibodies alone, and none of the control sections showed positive immunoreactivity.
In general, for double labeling performed with antibodies raised against the same species, e.g., rabbit, one-by-one staining with chromogen is well documented (Lan et al. 1995
Characterization of Antibody Against C9orf10 Peptide To study C9orf10 expression at the protein level in the mouse brain, we raised an antibody against C9orf10 in rabbit using two peptides (JB204 and JB205). Figure 1 shows that Western blot analysis detected one prominent protein band with an apparent molecular mass of 120 kDa. This band disappeared when the antibody was preabsorbed with peptide JB205 but not with peptide JB204 (data not shown), suggesting that the antibody specifically recognized C9orf10 through peptide JB205. This antibody recognized neurons such as Purkinje cells (Figures 2 A and 2B), and immunoreactivity was diminished by preincubation with peptide JB205. These results indicate that the antibody was specific to C9orf10 in Western blot analysis and IHC.
The specificity of the anti-Pur antibody was also examined for further experiments. The antibody also recognized Purkinje cells, and the immunoreactivity was diminished by preincubation with Pur peptide (Figures 2C and 2D).
Coimmunoprecipitation of C9orf10 With Pur
Developmental Expression of C9orf10 in the Mouse Brain We determined the changes in C9orf10 expression during mouse development. Figure 4 shows that C9orf10 was expressed in the embryonic brain [at 12 days after gestation (E12)] at a level similar to that of neonatal brain (5 days after birth), whereas no Pur was detected at E12, showing that C9orf10 was expressed at an earlier stage of development than was Pur . C9orf10 expression in the brain increased postnatally and was maintained at an adult level beyond 4 weeks after birth. In contrast to C9orf10, Pur was expressed from 5 days after birth, and the expression was maximal beyond 4 weeks.
Spatial Expression of C9orf10 in the Mouse Brain The spatial expression of C9orf10 was analyzed by IHC (Figure 5 ). At 4 weeks after birth, both C9orf10 and Pur became strongly expressed, but some differences in regional expression were also noted (boxed regions in Figure 5, panels M vs N, O vs P, Q vs R, and S vs T). Higher magnifications of the boxed regions are shown in Figures 5C–5T. Essentially, Pur was detected in all of the brain regions examined, whereas the levels of C9orf10 were much lower in particular regions of the brain, including the superior colliculus (Figure 5M), mid-brain (Figure 5O), pons (Figure 5Q), and the granular layer of the cerebellum (gl in Figure 5S). These results suggest that the regional expression in the brain of C9orf10 is differentially regulated, whereas the C9orf10-expressing region was almost always included in Pur -expressing brain regions.
Coexpression of C9orf10 With Pur in Cells in IHCIHC analyses showed that C9orf10 and Pur proteins were coexpressed in some restricted brain regions (Figure 5). Furthermore, both proteins were coimmunoprecipitated by anti-Pur antibody (data not shown) or anti-C9orf10 antibody (Figure 3). Nevertheless, this does not necessarily mean that C9orf10 and Pur were coexpressed in the same cells. Hence, to unambiguously show the coexpression of the two proteins in cells, we focused on the cerebral cortex in IHC. For simultaneous staining with antibodies against C9orf10 or Pur , we adopted a unique method using fluorescent labeling followed by DAB staining, because both antibodies to be used were raised in rabbits. First, we incubated cells with anti-C9orf10 antibody using Alexa Fluor 488–labeled secondary antibody, followed by heating in citrate buffer, pH 6.0, to inactivate antibodies, and then incubated them again with anti-Pur antibody with biotinylated secondary antibody using the avidin-biotinylated-peroxidase complex (ABC) and DAB. Judging from the immunoreactivity patterns (Figure 6
), anti-C9orf10 antibody (Figures 6A and 6C) and anti-Pur antibody (Figures 6B and 6D) highlighted the same cells. Note also that residual C9orf10 immunoreactivity was abolished by heating, because biotinylated secondary antibody alone did not show immunoreactivity (Figures 6E and 6F). Thus, these results show that C9orf10 and Pur are coexpressed in the same cells in the cerebral cortex.
Neuron-specific Expression of C9orf10 Protein in the Mouse Brain The immunoreactivity pattern of C9orf10 suggested that expression was restricted to neuronal cells (Figure 5). As shown in Figure 7 , this was indeed the case, because all of the cells exhibiting C9orf10 immunoreactivity were also detected by NeuN immunoreactivity in the hippocampus (Figures 7A–7C) and cerebral cortex (Figures 7D–7F). Anti-NeuN antibody detects the neuron-specific nuclear protein, NeuN (Mullen et al. 1992 , the major postsynaptic density protein (Kennedy et al. 1983 , including transport and translation of particular sets of mRNAs in the neuronal dendrites.
This study showed that C9orf10 is associated with polyribosomal Pur -poly(A)mRNPs in a reverse immunoprecipitation analysis using anti-C9orf10 antibody (Figure 3), consistent with others' observations that C9orf10 is present in polyribosome-bound (translated) but not in polyribosome-free (non-translated) fractions from the rat cerebral cortex (Angenstein et al. 2005 and maximal at 4 weeks. At 4 weeks, expression in the brain region was restricted and seemed to be included in the Pur -expressing region (Figure 3). These observations may give some hints on its function. One possible function is that C9orf10 cooperates with Pur in neurons coexpressing the two proteins at a translational level. Another possibility is that C9orf10 may escort Pur -containing mRNA subsets to the cytoplasm after processing nascent mRNAs within nuclei, because the protein is reportedly detected in the human spliceosomes (Rappsilber et al. 2002 (Ohashi et al. 2002 -mRNPs contain two distinct motor proteins (myosin Va and kinesin 5) in addition to one of the rough endoplasmic reticulum (rER) marker proteins, BiP, and we suggested that vesiculated rERs may be involved in the trafficking of Pur -mRNPs (Ohashi et al. 2002 -mRNPs to such vesicles that are derived from rER, because C9orf10 has amino acid sequences with the structural features of a transmembrane domain (Holden and Raymond 2003
In conclusion, our findings suggest that C9orf10, in addition to other possible functions that have not yet been determined, plays a cooperative role with Pur
This work was supported by a grant from the "Academic Frontiers" Project of the Ministry of Education, Culture, Sports, Science, and Technology of Japan and a Nihon University Research Grant for Assistants and Young Researchers (2005). We thank Kazusa DNA Research Institute for the KIAA0183 (C9orf10) DNA. We also thank Taeko Takanaka for excellent technical assistance.
Received for publication January 14, 2008; accepted March 24, 2008
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